NucBind results for job DR000025 (your_protein)(DNA)


Below are the predicted protein-DNA binding residues. The results for protein-RNA binding are available at this link.

   Predicted DNA-/RNA-binding sites

Visualization

General Information

PDB template Ligand Download Sequence length Number of predicted binding sites Predicted binding residues
3zkcB DNA Complex 82 18 20,26,27,28,36,37,38,39,40,42,43,46,49,50,51,52,54,55
Download the NucBind result
Download the svm result
Download the coach result
The visualization is powered by 3Dmol.

Reference

  • H. Su, M. Liu, S. Sun, Z. Peng, J. Yang, Improving the prediction of protein-nucleic acids binding residues via multiple sequence profiles and the consensus of complementary algorithms, Bioinformatics, in press (2018).