PepBind is a sequence-based method for protein-peptide binding residues prediction. It combines the predictions from an ab-initio method SVMpep and two template-based methods S-SITE and TM-SITE. SVMpep was trained with features from four complementary sequence profiles. S-SITE and TM-SITE predict the binding residues by transferring the annotations from homologous templates in a peptide-specific template library. For a submitted query protein sequence, the returned results include the predicted peptide-binding residues with propensity scores. Read more about the PepBind algorithm...

[Example] [Datasets]
Please copy and paste your protein sequence in FASTA format below). Click here for an example FASTA input

Or upload the sequence file:

Email: (Optional, where results will be sent to)

ID: (Optional, your given name to this protein)